DNA Binding Studies and Cytotoxicity of a Dinuclear Pt(II) Diazapyrenium-Based Metallo-supramolecular Rectangular Box

The interaction with native DNA of a 2,7-diazapyrenium-based ligand 1 and its Pt(II) rectangular metallacycle 2 is explored through circular and linear dichroism and fluorescence spectroscopies. The metal-free ligand 1 binds through intercalation, with a binding constant of approximately 5×10(5) M(-1) , whereas the metallacycle 2 binds and bends the DNA with a binding constant of 7×10(6) M(-1) . PCR assays show that metallo-supramolecular box 2 interferes with DNA transactions in vitro whereas the intercalator 1 does not. The metallacycle is active against four human cancer cell lines, with IC(50) values ranging between 3.1 and 19.2?μM and shows similar levels of efficacy, but a different spectrum of activity, to cisplatin.     

Complexes of tetracyclines with divalent metal cations investigated by stationary and femtosecond-pulsed techniques

Spectroscopic techniques both in steady-state (in absorption and emission) and pulsed (absorption of excited states with femtosecond resolution) conditions were used to study the complexation process between six molecules belonging to the tetracycline family and Mg(2+); in the case of TC the study was extended to the metal ions Ca(2+) and Cu(2+). The study was carried out in aqueous solution at various pH values, where one acid-base form of the substrate prevails over the others. The processing of experimental results, performed by means of Singular Value Decomposition and Global Analysis methods, allowed us to evaluate the extent of interaction through the association constants, to identify the number of equilibria present in solution and the stoichiometry (1:1 or 1:2) of the tetracycline:metal ion complex, and to define the spectral and photophysical properties of the latter (in terms of fluorescence quantum yields, lifetimes and rate constants). In fact, the (allowed) radiative decay process is a minor root for the lowest excited state of the complexes which mainly decay to the ground state by internal conversion. Details of the complexation sites are proposed for the various protonated forms of tetracyclines, and for the various cations in the case of TC. In particular, the molecular structure seems to affect significantly the dynamics of interaction when the upper peripheral region of tetracycline is rich in additional hydroxyl groups. Moreover, the state of protonation of the substrate produces changes in the order of the complexation sites, whose affinity for the cation increases significantly when they are negatively charged owing to the loss of protons. Magnesium and calcium (hard cations) give similar interactions, at least in acid solution, while copper(ii) (borderline cation) binds more efficiently on different sites, thus forming complexes with different properties.     

New half sandwich Ru(II) coordination compounds for anticancer activity

With the aim of expanding the structure-activity relationship investigation, the series of Ru(II) half sandwich coordination compounds of the type [Ru([9]aneS3)(chel)(L)](n+) previously described by us (where [9]aneS3 is the neutral face-capping ligand 1,4,7-trithiacyclononane, chel is a neutral or anonic chelating ligand, L = Cl(-) or dmso-S, n = 0-2) was extended to 1,4,7-triazacyclononane ([9]aneN3). In addition, new neutral N-N, and anionic N-O and O-O chelating ligands, i.e. dach (trans-1,2-diaminocyclohexane), pic(-) (picolinate), and acac(-) (acetylacetonate), were investigated in combination with both [9]aneS3 and [9]aneN3. Overall, ten new half-sandwich complexes were prepared and fully characterized and their chemical behaviour in aqueous solution was established. The single-crystal X-ray structures of eight of them, including the versatile precursor [Ru([9]aneN3)(dmso-S)(2)Cl]Cl (9), were also determined. The results of in vitro antiproliferative tests performed on selected compounds against MDA-MB-231 human mammary carcinoma cells confirmed that, in this series, only compounds that hydrolyse the monodentate ligand at a reasonable rate show moderate activity, provided that the chelate ligand is a hydrogen bond donor.     

Analysis of some reaction pathways active during cyclopentadiene pyrolysis

The cyclopentadienyl radical (cC(5)H(5)) is among the most stable radical species that can be generated during the combustion and pyrolysis of hydrocarbons and it is generally agreed that its contribution to the gas phase reactivity is significant. In this study the kinetics of one key cC(5)H(5) reaction channel, namely the reaction between cC(5)H(5) and cyclopentadiene (cC(5)H(6)), was investigated using ab initio calculations and RRKM/Master Equation theory. It was found that most of the excited C(5)H(5)_C(5)H(6) adducts formed by the addition of cC(5)H(5) to cC(5)H(6) decompose back to reactants and that the major reaction products are, in order of importance, indene, vinylfulvene (a most probable styrene precursor), phenylbutadiene, and benzene. The preferred reaction pathway of the C(5)H(5)_C(5)H(6) adduct is started by the migration of the tertiary hydrogen of the C(5)H(5) ring to a vicinal carbon and followed by the β-opening of the C(5)H(6) ring, which is the rate determining step. Successive molecular rearrangements lead to decomposition to the four possible products. The kinetic constants for the four reaction channels, calculated at atmospheric pressure and interpolated in cm(3) mol(-1) s(-1) between 900 and 2000 K, are k(indene) = 10(25.197)T(-3.935)?exp(-11630/T(K)), k(vinylfulvene) = 10(65.077)T(-14.20)?exp(-37567/T(K)), k(benzene) = 10(29.172)T(-4.515)?exp(-20570/T(K)), and k(phenylbutadiene) = 10(16.743)T(-1.407)?exp(-11804/T(K)). The predictive capability of the reaction set so determined was tested through the simulations of recent cC(5)H(6) pyrolysis and combustion experiments using a detailed kinetic mechanism. A quantitative agreement with experimental data was obtained by assuming that vinylfulvene converts rapidly to stryrene, increasing its reaction channel by a factor of 2, and assuming that phenylbutadiene rapidly decomposes with equal probability to styrene and benzene.     

Synthesis and Spectroscopic Characterization of Thienopyrazine-Based Fluorophores for Application in Luminescent Solar Concentrators (LSCs)

Organic fluorophores have found broad application as emitters in luminescent solar concentrators (LSCs) for silicon photovoltaics. In particular, the preparation of organic conjugated systems with intense light-harvesting ability, emissions in the deep-red and NIR regions, and large Stokes shift values represent a very challenging undertaking. Here, we report a simple and easy way to prepare three symmetrical donor–acceptor–donor (DAD) organic-emitting materials based on a thienopyrazine core. The central core in the three dyes was modified with the introduction of aromatic substituents, aiming to affect their optical properties. The fluorophores were characterized by spectroscopic studies. In all cases, visible-NIR emissions with large Stokes shifts were found, highlighting these molecules as promising materials for the application in LSCs.     

A principal component analysis of precipitation patterns over northern Italy

Summary A principal component analysis of rainfalls recorded during five winters (1981–1985) at about 70 stations in Northern Italy has been performed. The spatial distribution of the first four eigenvectors (whose principal components cumulatively account for about 81% of the total variance) is presented and discussed. A subsequent rotation of the first four principal components led to new spatial distributions which are are also described. Moreover, the rotation allowed associating the first three rotated principal components with atmospheric circulation patterns typically occurring in the area and belonging to a classification scheme of weather types on the Po Valley previously introduced by other authors on the base of a visual scanning of three years of daily maps.

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Riassunto è stata eseguita una analisi in componenti principali di dati di precipitazione raccolti durante cinque inverni (1981–1985) in circa 70 stazioni dell'Italia settentrionale. Vengono presentate e discusse le distribuzioni spaziali dei primi quattro autovettori, le cui componenti principali spiegano cumulativamente circa 81% della varianza totale. Una successiva rotazione delle prime quattro componenti principali ha condotto a nuove distribuzioni spaziali, che vengono anch'esse descritte. Inoltre la rotazione ha permesso di associare alle prime tre componenti principali ruotate dei modelli di circolazione atmosferica, tipicamente ricorrenti sull'area in questione e facenti parte di uno schema di classificazione dei tipi di tempo sulla Valle Padana introdotto precedentemente da altri autori sulla base di uno ?scanning? visuale di tre anni di mappe giornaliere.

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Резюме Проводится анализ главхых компонент количества вьавших осадков в течение пяти зим (1981–1985), зарегестрированных на 70 станциях в Северной Италии. Предлагается и обсуждается пространственное распределение первых четырех собственных векторов. Последующее вращение первых четырех главных компонент приводит к новым пространственным распределениям, которые также описываются и анализируются. Кроме того, указанное вращение позволяет связать первые три вращающиеся главные компоненты с диаграммами атмосферной цирркуляции, которая является типичной для этой области и пренадлежит к скхеме классификации погоды в долине По, введенной ранее друими авторами на основе визуального сканирования суточных карт в течение трех лет.

     

Metallacycles of porphyrins as building blocks in the construction of higher order assemblies through axial coordination of bridging ligands: solution- and solid-state characterization of molecular sandwiches and molecular wires

Treatment of the octahedral Ru(II)-dimethyl sulfoxide complexes trans-RuCl(2)(dmso-S)(4) (1), trans-RuCl(2)(dmso-O)(2)(CO)(2) (2), and trans-RuCl(2)(dmso)(3)(CO) (3) with a stoichiometric amount of 5,10-bis(4'-pyridyl)-15,20-diphenylporphyrin (4'-cis-DPyP) yields, after chromatographic purification, the novel 2+2 molecular squares of formula [trans,cis,cis-RuCl(2)(dmso-S)(2)(4'-cis-DPyP)](2) (4), [trans,cis,cis-RuCl(2)(CO)(2)(4'-cis-DPyP)](2) (5), and [trans,cis,cis-RuCl(2)(dmso-S)(CO)(4'-cis-DPyP)](2) (6), respectively. Compound 6 exists as an equimolar mixture of the isomeric metallacycles 6a and 6b, depending on whether the 4'-N(py) rings of 4'-cis-DPyP's are trans to CO or to dmso-S. Compounds 4-6 were fully characterized by NMR and IR spectroscopy and by FAB mass spectrometry. Treatment of 5 with excess zinc acetate in chloroform/methanol mixtures led to the isolation of the corresponding zinc adduct [trans,cis,cis-RuCl(2)(CO)(2)(Zn x 4'-cis-DPyP)](2) (5Zn). Treatment of 5Zn with 1 equiv of a trans ditopic N-donor ligand L (L = 4,4'-bipy, 5,15-bis(4'-pyridyl)-2,8,12,18-tetra-n-propyl-3,7,13,17-tetramethylporphyrin (4'-trans-DPyP-npm), or 5,15-bis(4'-pyridyl)-10,20-diphenylporphyrin (4'-trans-DPyP)) leads readily and selectively, according to (1)H NMR spectroscopy, to the quantitative assembling of 2:2 supramolecular adducts of stacked metallacycles of formula [(5Zn)(2)(mu-L)(2)] (7-9), which were thoroughly characterized in solution by NMR spectroscopy. NMR features indicate that, at ambient temperature, the equilibrium between 5Zn and L to yield [(5Zn)(2)(mu-L)(2)] has an intermediate to slow rate on the NMR time scale (relatively broad signals for L) and is totally shifted toward the 2:2 product (all or nothing process). Single-crystal X-ray investigations showed that, depending on the nature of the bridging ligand, in the solid state these sandwich structures can either be maintained or originate polymeric chains formulated as [(5Zn)(mu-L)](infinity). When L = 4'-trans-DPyP, both solution- and solid-state data indicate that [(5Zn)(2)(mu-4'-trans-DPyP)(2)] (9) is a discrete supramolecular assembly of two molecular squares of metalloporphyrins axially connected through other porphyrins. In this molecular box, the two bridging porphyrins are coplanar at a distance of about 11.4 A. When L = 4,4'-bipy, the corresponding adduct 7 has the anticipated sandwich-like discrete architecture [(5Zn)(2)(mu-4,4'-bipy)(2)] in solution, but it assumes a stair-like polymeric wire structure in the solid state. The polymer [(5Zn)(mu-4,4'-bipy)](infinity) is made by 5Zn squares bridged by 4,4'-bipy ligands which are axially coordinated alternatively on the two opposite sides of each square. Our work clearly established that relatively simple supramolecular adducts of porphyrins, such as molecular squares, are suitable building blocks for the construction of more elaborate assemblies of higher order by axial coordination of bridging ligands.     

Bioremediation of toluene and naphthalene: development and validation of a GC-FID method for their monitoring

Bioremediation of toluene and naphthalene in liquid cultures of bacteria grown in the presence of these aromatic compounds as unique sources of carbon was investigated by gas chromatography (GC). For this purpose, a method based on the use of GC with flame ionization detection was developed and validated. Validation was carried out in terms of limit of detection (LOD), limit of quantitation (LOQ), linearity, precision and trueness. In the case of naphthalene, LOD and LOQ values of 0.43 and 0.72 mg kg(-1) were achieved. Linearity was established over one order of magnitude in the range of interest, i.e. 10-100 mg kg(-1). Excellent precision was obtained both in terms of intra-day repeatability and between-day precision on two concentration levels (RSD% lower than 0.5%). A recovery of 97.9 +/- 0.2% (n=3) was calculated by addition of 640 mg kg(-1) of naphthalene to the Bushnell & Haas mineral salts basal solution containing the micro-organisms. Findings clearly showed a reduction of the naphthalene content equal to 50% and 75% after two and four weeks of contact with the micro-organisms, whereas a lower degradation was shown in the case of toluene. Finally bioremediation activity was ascribed to two different microbial populations, Bordetella Petrii and Bacillus Sphericus, which survived in the polluted medium.     

Stepwise assembly of unsymmetrical supramolecular arrays containing porphyrins and coordination compounds

The stepwise coordination of meso-4'-pyridyl/phenyl porphyrins (4'-PyPs) to different metal centers proved to be an efficient synthetic approach leading to unsymmetrical arrays containing porphyrins and coordination compounds. The first step of this process, treatment of 4'-PyPs with a less than stoichiometric amount of cis,fac-RuCl2(Me2-SO)3(CO) (1), leads to the selective coordination of [cis,cis,cis-RuCl2(Me2SO)2(CO)] fragments ([Ru]) to some of the peripheral 4'-N sites of the 4'-PyPs. Column separation afforded four partially ruthenated 4'-PyPs in pure form: 4'-cis-DPyP[Ru] (2), 4'-trans-DPyP[Ru] (3), (4'-TPyP)[Ru] (4), and (4'-TPyP)[Ru]3 (5). These compounds, which have residual unbound peripheral 4'-N(py) sites (either one or three), were allowed to react with other metal centers that may belong either to a metalloporphyrin or to a coordination compound. When building blocks 2-5 were treated with [Ru(TPP)(CO)(EtOH)] (TPP = meso-tetraphenylporphyrin) in chloroform at room temperature, axial coordination of Ru(TPP)(CO) units ((Ru)) to the available 4'-N(py) sites readily occurred, generating the following arrays containing both perpendicular porphyrins and coordination compounds: (Ru)-(mu-4'-cis-DPyP)[Ru], (Ru)(mu-4'-trans-DPyP)[Ru], (Ru)3(mu-4'-TPyP)[Ru], and (Ru)(mu-4'-TPyP)[Ru]3. Furthermore, building blocks 2, 3, and 5 were treated with a series of coordination compounds capable of binding two pyridylporphyrins either cis to each other (trans-RuCl2(Me2SO)4 and trans,cis,cis-RuCl2(Me2SO)2(CO)2) or trans to each other (trans-PdCl2(C6H5CN)2). Homo- (Ru) and heterobimetallic (Ru-Pd) arrays with as many as seven metal atoms (six Ru and one Pd) and two 4'-PyPs were obtained as follows: trans,cis,cis-RuCl2(Me2SO)2(4'-cis-DPyP[Ru])2, trans,cis,cis-RuCl2(Me2SO)2(4'-trans-DPyP[Ru])2, trans,cis,cis-RuCl2(CO)2(4'-cis-DPyP[Ru])2, and trans-PdCl2(4'-TPyP[Ru]3)2. All the products were thoroughly characterized by 1H NMR spectroscopy. Since the [Ru] fragment is chiral, diastereomers are formed when two or more [Ru] units are bound to a porphyrin. We found that when two 4'-cis-DPyP[Ru] (2) units are coordinated cis to each other on the same metal center, the mutual anisotropic effect of the cis porphyrins differentiates the sulfoxide methyl resonances for the two forms. These and other results indicate that the pyridyl units react independently of the presence or absence of a substituent on the other py rings. Thus, the synthetic strategy should be a general method for linking diverse metal centers through pyridylporphyrins.